#cat beagle_out_20.snps_chr20.bgl.gz.gprobs| java -jar /projects/bsi/gentools/src/BeagleUtils/v3/bin/gprobsmetrics.jar > beagle_chr20_util_gen_r2
cat chr20.one.phased.impute2_fil_chr20.gprobs| java -jar /projects/bsi/gentools/src/BeagleUtils/v3/bin/gprobsmetrics.jar > impute_chr20_util_gen_r2
